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2.
Rev. argent. microbiol ; 51(3): 255-258, set. 2019. ilus, tab
Article in Spanish | LILACS | ID: biblio-1041834

ABSTRACT

La espectrometría de masas (EM) (matrix assisted laser desorption ionization-time of flight) MALDI-TOF demostró ser una herramienta robusta para la identificación de numerosos grupos taxonómicos. No obstante, presenta limitaciones. Una ventaja clave de la técnica es la flexibilidad para la incorporación de espectros proteicos de microorganismos ausentes en la base de datos comercial. Dada la prevalencia de Burkholderia contaminans en los pacientes fibroquísticos en Argentina, y a que en ellos es crucial el diagnóstico microbiológico rápido y confiable, la EM MALDI-TOF surge como una herramienta estratégica. El objetivo del trabajo fue desarrollar una base de datos adicional con espectros peptídicos de aislamientos de referencia de B. contaminans. La misma demostró ser exitosa para la identificación del 97% de los aislamientos analizados. Por lo cual la EM MALDI-TOF con la base de datos extendida resultó ser una herramienta útil para la identificación y diferenciación de otras especies relacionadas a B. contaminans.


MALDI-TOF (matrix assisted laser desorption ionization-time of flight) mass spectrometry (MS) proved to be a robust tool for the identification of numerous taxonomic groups. However, it has limitations. A key advantage of this technique is the flexibility for the incorporation of protein profiles of microorganisms not included in the commercial database. Due to the prevalence of Burkholderia contaminans in fibrocystic patients in Argentina and the fact that rapid and reliable microbiological diagnosis is crucial in them, MALDI-TOF MS emerges as a strategic tool. The aim of this work was to develop an additional database with peptide spectra of reference isolates of B. contaminans. This database demonstrated to be successful for the identification of 97% of the isolates analyzed. Therefore, MALDI-TOF MS with the extended database was a useful tool for the identification and differentiation of other related species to B. contaminans.


Subject(s)
Humans , Databases, Factual , Bacteriological Techniques , Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization/methods , Burkholderia/isolation & purification , Species Specificity , Bacterial Proteins/analysis , Algorithms , Reproducibility of Results , Burkholderia Infections/complications , Burkholderia Infections/microbiology , Burkholderia/classification , Burkholderia/chemistry , Cystic Fibrosis/complications , Cystic Fibrosis/microbiology
3.
Rev. argent. microbiol ; 51(1): 84-92, mar. 2019. ilus, tab
Article in Spanish | LILACS | ID: biblio-1041820

ABSTRACT

El complejo Burkholderia cepacia está formado por 22 especies conocidas como patógenos oportunistas en personas inmunocomprometidas, especialmente en aquellas con fibrosis quística. También se aíslan de infecciones nosocomiales y son difíciles de erradicar debido a su capacidad intrínseca para resistir una gran variedad de antibióticos. En general, estas especies presentan genomas de gran tamaño (hasta 9 Mpb) divididos en 2-5 replicones. Esta característica aporta una gran versatilidad metabólica, que se considera importante para habitar el suelo, el agua, las plantas, incluso los nódulos en leguminosas. Algunas especies del complejo B. cepacia exhiben actividades benéficas, como biorremediación, biocontrol y promoción del crecimiento vegetal. No obstante, debido a su papel en infecciones de humanos, su uso en la agricultura está restringido. El complejo B. cepacia es un tema constante de estudio debido a su impacto en el sector salud y su potencial en la agricultura. En este trabajo se examina la historia del complejo B. cepacia y se revisa la información reciente relacionada con este grupo de bacterias.


The Burkholderia cepacia complex is a group of 22 species, which are known as opportunistic pathogens in immunocompromised people, especially those suffering from cystic fibrosis. It is also found in nosocomial infections and is difficult to eradicate due to intrinsic resistance to several antibiotics. The species have large genomes (up to 9 Mbp), distributed into 2-5 replicons. These features significantly contribute to genome plasticity, which makes them thrive in different environments like soil, water, plants or even producing nodules in legume plants. Some B. cepacia complex species are beneficial in bioremediation, biocontrol and plant-growth promotion. However, because the B. cepacia complex is involved in human infection, its use in agriculture is restricted. B. cepacia complex is being constantly studied due to the health problems that it causes and because of its agricultural potential. In this review, the history of B. cepacia complex and the most recently published information related to this complex are revised.


Subject(s)
Burkholderia cepacia complex/classification , Burkholderia cepacia complex/pathogenicity , Genetic Profile , Phenotype , Opportunistic Infections/microbiology , Sequence Analysis, DNA/methods , Burkholderia Infections/epidemiology
4.
Clinics ; 73: e166, 2018. tab, graf
Article in English | LILACS | ID: biblio-890746

ABSTRACT

OBJECTIVES: To evaluate the impact of Burkholderia cepacia complex colonization in cystic fibrosis patients undergoing lung transplantation. METHODS: We prospectively analyzed clinical data and respiratory tract samples (sputum and bronchoalveolar lavage) collected from suppurative lung disease patients between January 2008 and November 2013. We also subtyped different Burkholderia cepacia complex genotypes via DNA sequencing using primers against the recA gene in samples collected between January 2012 and November 2013. RESULTS: From 2008 to 2013, 34 lung transplants were performed on cystic fibrosis patients at our center. Burkholderia cepacia complex was detected in 13 of the 34 (38.2%) patients. Seven of the 13 (53%) strains were subjected to genotype analysis, from which three strains of B. metallica and four strains of B. cenocepacia were identified. The mortality rate was 1/13 (7.6%), and this death was not related to B. cepacia infection. CONCLUSION: The results of our study suggest that colonization by B. cepacia complex and even B. cenocepacia in patients with cystic fibrosis should not be considered an absolute contraindication to lung transplantation in Brazilian centers.


Subject(s)
Humans , Male , Female , Adolescent , Adult , Young Adult , Lung Transplantation/adverse effects , Burkholderia cepacia/isolation & purification , Burkholderia Infections/etiology , Cystic Fibrosis/microbiology , Phylogeny , Time Factors , Brazil/epidemiology , DNA, Bacterial , Prospective Studies , Regression Analysis , Risk Factors , Lung Transplantation/mortality , Treatment Outcome , Burkholderia Infections/mortality , Cystic Fibrosis/surgery , Cystic Fibrosis/complications , Cystic Fibrosis/mortality , Kaplan-Meier Estimate , Contraindications, Procedure , Intensive Care Units , Length of Stay
5.
Mem. Inst. Oswaldo Cruz ; 111(1): 37-42, Jan. 2016. tab
Article in English | LILACS | ID: lil-771076

ABSTRACT

Cystic fibrosis (CF) patients with Burkholderia cepacia complex (Bcc) pulmonary infections have high morbidity and mortality. The aim of this study was to compare different methods for identification of Bcc species isolated from paediatric CF patients. Oropharyngeal swabs from children with CF were used to obtain isolates of Bcc samples to evaluate six different tests for strain identification. Conventional (CPT) and automatised (APT) phenotypic tests, polymerase chain reaction (PCR)-recA, restriction fragment length polymorphism-recA, recAsequencing, and matrix-assisted laser desorption ionization-time of flight (MALDI-TOF) were applied. Bacterial isolates were also tested for antimicrobial susceptibility. PCR-recA analysis showed that 36 out of the 54 isolates were Bcc. Kappa index data indicated almost perfect agreement between CPT and APT, CPT and PCR-recA, and APT and PCR-recA to identify Bcc, and MALDI-TOF and recAsequencing to identify Bcc species. The recAsequencing data and the MALDI-TOF data agreed in 97.2% of the isolates. Based on recA sequencing, the most common species identified were Burkholderia cenocepacia IIIA (33.4%),Burkholderia vietnamiensis (30.6%), B. cenocepaciaIIIB (27.8%), Burkholderia multivorans (5.5%), and B. cepacia (2.7%). MALDI-TOF proved to be a useful tool for identification of Bcc species obtained from CF patients, although it was not able to identify B. cenocepacia subtypes.


Subject(s)
Child , Child, Preschool , Female , Humans , Infant , Male , Burkholderia Infections/virology , Burkholderia cepacia complex/genetics , Cystic Fibrosis/virology , Bacterial Typing Techniques , Bacterial Proteins/genetics , Burkholderia cepacia complex/classification , DNA, Bacterial/genetics , Oropharynx/virology , Phenotype , Polymerase Chain Reaction , Polymorphism, Restriction Fragment Length , Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization
6.
Yonsei Medical Journal ; : 97-102, 2016.
Article in English | WPRIM | ID: wpr-186117

ABSTRACT

PURPOSE: Hospital-acquired Burkholderia cepacia (B. cepacia) infection are not commonly recorded in patients without underlying lung disease, such as cystic fibrosis and chronic granulomatous disease. However, in 2014, B. cepacia appeared more frequently in pediatric blood samples than in any other year. In order to access this situation, we analyzed the clinical characteristics of B. cepacia infections in pediatric patients at our hospital. MATERIALS AND METHODS: We conducted a retrospective study of blood isolates of B. cepacia taken at our hospital between January 2004 and December 2014. Patient clinical data were obtained by retrospective review of electronic medical records. We constructed a dendrogram for B. cepacia isolates from two children and five adult patients. RESULTS: A total of 14 pediatric patients and 69 adult patients were identified as having B. cepacia bacteremia. In 2014, higher rates of B. cepacia bacteremia were observed in children. Most of them required Intensive Care Unit (ICU) care (12/14). In eleven children, sputum cultures were examined, and five of these children had the same strain of B. cepacia that grew out from their blood samples. Antibiotics were administered based on antibiotic sensitivity results. Four children expired despite treatment. Compared to children, there were no demonstrative differences in adults, except for history of ICU care. CONCLUSION: Although there were not many pediatric cases at our hospital, awareness of colonization through hospital-acquired infection and effective therapy for infection of B. cepacia is needed, as it can cause mortality and morbidity.


Subject(s)
Adolescent , Adult , Aged , Aged, 80 and over , Child , Child, Preschool , Female , Humans , Infant , Male , Middle Aged , Young Adult , Anti-Bacterial Agents/therapeutic use , Bacteremia/drug therapy , Burkholderia Infections/blood , Burkholderia cepacia/drug effects , Cross Infection/blood , Disease Outbreaks , Incidence , Intensive Care Units , Microbial Sensitivity Tests , Republic of Korea/epidemiology , Retrospective Studies , Treatment Outcome
7.
Rev. Inst. Med. Trop. Säo Paulo ; 56(1): 71-76, Jan-Feb/2014. tab, graf
Article in English | LILACS | ID: lil-702066

ABSTRACT

Aim: The objective was to describe an outbreak of bloodstream infections by Burkholderia cepacia complex (Bcc) in bone marrow transplant and hematology outpatients. Methods: On February 15, 2008 a Bcc outbreak was suspected. 24 cases were identified. Demographic and clinical data were evaluated. Environment and healthcare workers' (HCW) hands were cultured. Species were determined and typed. Reinforcement of hand hygiene, central venous catheter (CVC) care, infusion therapy, and maintenance of laminar flow cabinet were undertaken. 16 different HCWs had cared for the CVCs. Multi-dose heparin and saline were prepared on counter common to both units. Findings: 14 patients had B. multivorans (one patient had also B. cenopacia), six non-multivorans Bcc and one did not belong to Bcc. Clone A B. multivorans occurred in 12 patients (from Hematology); in 10 their CVC had been used on February 11/12. Environmental and HCW cultures were negative. All patients were treated with meropenem, and ceftazidime lock-therapy. Eight patients (30%) were hospitalized. No deaths occurred. After control measures (multidose vial for single patient; CVC lock with ceftazidime; cleaning of laminar flow cabinet; hand hygiene improvement; use of cabinet to store prepared medication), no new cases occurred. Conclusions: This polyclonal outbreak may be explained by a common source containing multiple species of Bcc, maybe the laminar flow cabinet common to both units. There may have been contamination by B. multivorans (clone A) of multi-dose vials.


O objetivo foi descrever um surto de infecções da corrente sanguínea por complexo B. cepacia (Bcc) nos ambulatórios de hematologia e transplante de medula óssea. Métodos: Em 15/02/2008, um surto de Bcc foi suspeitado. 24 casos foram identificados. Os dados demográficos e clínicos foram avaliados. Mãos de profissionais da saúde e ambiente foram cultivadas. Espécies foram determinadas e tipadas. Reforço da higiene das mãos, cuidados com cateteres, terapia de infusão e manutenção da câmara de fluxo laminar foram realizadas. 16 profissionais de saúde (PS) diferentes manipularam os cateteres. Heparina multidoses e soro eram preparadas em um balcão comum a ambas as unidades. Resultados: 14 pacientes tiveram B. multivorans (um paciente teve também B. cenopacia), 6 Bcc não-multivorans e um teve um agente não pertencente a Bcc. Clone A de B. multivorans ocorreu em 12 pacientes (da Hematologia), em 10 o cateter havia sido utilizado nos dias 11 ou 12 de fevereiro. Culturas ambientais e de PS foram negativos. Todos os pacientes foram tratados com meropenem e selo de ceftazidima. Oito pacientes (30%) foram hospitalizados. Não ocorreram mortes. Após as medidas de controle, nenhum novo caso ocorreu. Conclusões: Este surto policlonal pode ser explicado por uma fonte comum contendo várias espécies de Bcc, talvez a câmara de fluxo laminar comum a ambas as unidades. Pode ter havido contaminação por B. multivorans (clone A) de frascos multi-dose.


Subject(s)
Adolescent , Adult , Child , Child, Preschool , Female , Humans , Male , Middle Aged , Young Adult , Bacteremia/microbiology , Burkholderia Infections/microbiology , Burkholderia cepacia complex/isolation & purification , Catheter-Related Infections/microbiology , Disease Outbreaks , Bone Marrow Transplantation , Bacteremia/epidemiology , Burkholderia Infections/epidemiology , Catheter-Related Infections/epidemiology , Hematologic Diseases
8.
Med. lab ; 19(9-10): 465-472, 2013. ilus, tab
Article in Spanish | LILACS | ID: biblio-834764

ABSTRACT

Resumen: La melioidosis es una enfermedad infecciosa causada por una bacteria gram-negativa intracelularBurkholderia pseudomallei. Este microorganismo es un saprofito ambiental en regiones endémicas,algunas de ellas ubicadas probablemente en el territorio nacional y presenta alto riesgo de propagación como epidemia en zonas no endémicas. La melioidosis es una enfermedad clínicamente diversa, la mayoría de las infecciones son asintomáticas; sin embargo, si el paciente es sintomático, se puede clasificar como aguda o crónica según su persistencia. La presentación clínica más común es la afectación pulmonar y al diagnóstico predominan baciloscopias persistentemente negativas. Aquí se presenta un caso de un paciente con tos crónica, expectoración mucopurulenta, sudoración nocturna y disnea.


Abstract: Melioidosis is an infectious disease caused by the intracellular gram-negative bacterium Burkholderia pseudomallei. This microorganism is an environmental saprophyte in endemic regions, some of which are likely located in our country and have a high risk of spreading to non-endemic areas. Melioidosis is a clinically diverse disease. Most infections are asymptomatic; however, if symptoms are present, the disease can be classified as acute or chronic according to persistence of symptoms. In addition, lung involvement is the most common clinical presentation and one of the main diagnostic features is consistently negative bacilloscopy. Here we present a case report of a patient with chronic cough, mucopurulent expectoration, night sweats and dyspnea.


Subject(s)
Humans , Burkholderia , Burkholderia Infections , Burkholderia pseudomallei , Melioidosis
9.
Rev. colomb. biotecnol ; 14(1): 224-232, ene.-jun. 2012. ilus, graf, tab
Article in Spanish | LILACS | ID: lil-656955

ABSTRACT

El trabajo tuvo como objetivo evaluar la actividad antibacteriana de extractos de hojas de Melia azedarach L. sobre seis bacterias patógenas. Inicialmente mediante extracción por el método Soxhlet se obtuvo extracto total en etanol y a partir de éste se prepararon fracciones líquido-líquido con éter de petróleo y acetato de etilo. El extracto total y las dos fracciones fueron diluidos a diferentes concentraciones (ppm) para evaluar in vitro su actividad antibacteriana. Las bacterias de mayor susceptibilidad fueron las patógenas de humanos Enterococcus faecalis, Escherichia coli, Pseudomonas aeruginosa y Klebsiella oxytoca, en relación a la fitopatógena Burkholderia glumae quien mostró resistencia a todos los tratamientos. Las bacterias patógenas fueron más susceptibles a la fracción éter de petróleo a concentración mínima de 25 ppm. El screen fitoquímico de la planta indicó presencia de metabolitos secundarios tipo alcaloides, terpenos/esteroles, saponinas, taninos y antocianinas. Estos resultados evidencian el posible uso de M. azederach como alternativa de control biológico sobre las bacterias analizadas.


The work was objective to evaluate the antibacterial activity of extracts from leaves of Melia azedarach (L) on six pathogenic bacteria. Total ethanol extract was obtained initially by extraction with method Soxhlet and from this prepared liquid-liquid fractions with petroleum ether and ethyl acetate. The total extract and the two fractions were diluted at different concentrations (ppm) to evaluate its antibacterial activity in vitro. More susceptible bacteria were the pathogenic human Enterococcus faecalis, Escherichia coli, Pseudomonas aeruginosa and Klebsiella oxytoca, in relation to the plant pathogen Burkholderia glumae who showed resistance to all treatments. Pathogenic bacteria were more susceptible to the fraction of petroleum ether to the minimum concentration of 25 ppm. Screen plant phytochemical indicated presence of secondary metabolites type alkaloids, terpenes/sterols, saponins, tannins and anthocyanins. These results demonstrate the potential use of M. azederach as biological control alternatively on analysed bacterial.


Subject(s)
Azadirachta , Melia , Melia azedarach , Bacterial Growth , Burkholderia Infections , Enterococcus faecalis , Escherichia coli , Klebsiella oxytoca , Plant Leaves , Pseudomonas aeruginosa
10.
Asian Pacific Journal of Tropical Biomedicine ; (12): 166-168, 2012.
Article in English | WPRIM | ID: wpr-303604

ABSTRACT

Burkholderia cepacia (B. cepacia) infection is rarely reported in an immunocompetent host. It is a well known occurence in patients with cystic fibrosis and chronic granulomatous disease where it increases both morbidity and mortality. It has also been included in the list of organisms causing nosocomial infections in an immunocompetent host, most of them transmitted from the immunocompromised patient in which this organism harbors. We report a rare case of isolation of B. cepacia from the bronchoalveolar lavage fluid of an immunocompetent agriculturist who presented with productive cough and fever associated with a pyopneumothorax. This is the first case of community acquired infection reported in an immunocompetent person in India.


Subject(s)
Adult , Humans , Male , Anti-Bacterial Agents , Therapeutic Uses , Azithromycin , Therapeutic Uses , Bronchoalveolar Lavage Fluid , Microbiology , Burkholderia Infections , Diagnosis , Drug Therapy , Burkholderia cepacia , Ceftazidime , Therapeutic Uses , Ceftizoxime , Therapeutic Uses , Community-Acquired Infections , Diagnosis , Drug Therapy , Drug Resistance, Multiple, Bacterial , Immunocompetence , India , Pneumothorax
11.
Rev. argent. microbiol ; 43(3): 168-175, jun.-set. 2011. ilus, tab
Article in Spanish | LILACS | ID: lil-634687

ABSTRACT

Las especies del complejo Burkholderia cepacia (CBC) son capaces de causar infecciones crónicas del tracto respiratorio en pacientes con fibrosis quística y en otros individuos inmunocomprometidos. La mayoría de estas especies exhiben alta resistencia a la terapia antibiótica, lo que genera la necesidad de una detección rápida y precisa para poder implementar estrategias de control adecuadas. En este trabajo se utilizó la técnica de reacción en cadena de la polimerasa (PCR) para amplificar el gen recA (PCR-recA), con el fin de identificar microorganismos pertenecientes al CBC. Con este método molecular como referencia, se evaluó la sensibilidad (S) y la especificidad (E) de dos sistemas de identificación comerciales automatizados, VITEK 2 y API 20NE (bioMérieux®), así como también el valor de las pruebas bioquímicas manuales más representativas para la identificación de estos microorganismos. El método VITEK 2 presentó una S del 71,1 % y una E del 100 %; para el método API 20NE, estos valores fueron 69,7 % y 90,2 %, respectivamente. En cuanto a las pruebas fenotípicas manuales, los resultados obtenidos fueron más heterogéneos, lo que posiblemente se deba a que estas bacterias podrían sufrir presión selectiva para sobrevivir en pacientes crónicos y perder factores fenotípicos característicos. La técnica de PCR-recA resultó de fácil implementación, por lo que cabe considerar a esta técnica de identificación como una opción viable, aun en laboratorios de diagnóstico clínico de mediana complejidad.


Species belonging to the Burkholderia cepacia complex (BCC) are capable of causing chronic respiratory tract infections in patients suffering from cystic fibrosis as wel as in immunocompromised individuals. Most of these species are highly resistant to antibiotic therapy, generating the need for their rapid and accurate detection for the proper treatment and clinical management of these patients. In this wok, the polymerase chain reaction (PCR) technique based on the amplification of the recA gene (PCR-recA) was applied for an accurate identification of bacteria belonging to the BCC. Sensitivity (S) and specificity (E) of two biochemically-based commercial automated systems, API 20NE and VITEK 2 (bioMérieux®), and of the most representative biochemical manual tests for the identification of the Burkholderia cepacia complex were herein evaluated. The commercial systems VITEK 2 and API 20NE showed the following sensitivity and specificity vaues for identification to the species level, S: 71.1 %, E: 100 %, S: 69.7 %, E: 90.2 %, respectively. More complex results were observed for phenotypic manual tests, since BCC bacteria can undergo selective pressure to survive in chronic patients causing the loss of their typical phenotypic characteristics. The PCR-recA technique was easy to implement even in medium-complexity clinical diagnostic laboratories.


Subject(s)
Humans , Bacterial Typing Techniques/methods , Burkholderia Infections/microbiology , Burkholderia cepacia complex/isolation & purification , Reagent Kits, Diagnostic , Respiratory Tract Infections/microbiology , Automation , Bacterial Proteins/genetics , Burkholderia Infections/diagnosis , Burkholderia Infections/etiology , Colorimetry/methods , Cystic Fibrosis/complications , Disease Susceptibility , DNA, Bacterial/genetics , Genes, Bacterial , Genotype , Polymerase Chain Reaction/methods , Reference Standards , Reproducibility of Results , Rec A Recombinases/genetics , Respiratory Tract Infections/diagnosis , Respiratory Tract Infections/etiology , Sensitivity and Specificity , Software
12.
Rev. HCPA & Fac. Med. Univ. Fed. Rio Gd. do Sul ; 31(2): 138-144, 2011. ilus, tab
Article in English | LILACS | ID: biblio-834406

ABSTRACT

Background: Burkholderia complex (Bcc) infections in cystic fibrosis (CF) patients are associated with decline in lung function and reduced survival. The potential transmissibility of Bcc among CF patients has been reported, indicating that strict segregation of CF patients with Bcc is crucial. Aims: To standardize the PCR-RFLP (polymerase chain reaction-restriction fragment length polymorphism) assay in order to identify Bcc species and to establish the prevalence of Bcc species and their susceptibility profile among CF patients seen at the Hospital de Clínicas de Porto Alegre (HCPA). Methods: The classification of the clinical isolates recovered from respiratory tract specimens of CF patients as Bcc was achieved using the API-20NE® phenotypic commercial system. The identification of the Bcc species was performed using PCR-RFLP. The antimicrobial disc diffusion susceptibility testing was performed according to the CLSI (2006). Results: API-20NE® was able to identify Bcc isolates (244 specimens), such as B. cepacia, indicating that it was not able to distinguish among the Bcc species. The PCR-RFLP molecular method discriminated the eight reference Bcc species, thus validating the method for clinical isolates. Bcc prevalence determined by PCR-RFLP was 10.6% (26/244). The molecular analysis identified B. cenocepacia in 53.8% (14/26) of infected patients, B. multivorans in 15.4% (4/26), and B. vietnamiensis and B. ambifaria in 7.7% (2/26). The antibiotic resistance profile was variable among Bcc species. Conclusions: The PCR-RFLP method was validated for the identification of Bcc species. B. cenocepacia proved to be the most prevalent species among the CF patients seen at the HCPA.


Introdução: Infecções por bactérias do complexo Burkholderia cepacia (CBC) em pacientes com fibrose cística (FC) estão associadas a declínio da função pulmonar e diminuição da sobrevida. O potencial de transmissibilidade de CBC entre pacientes com FC é uma realidade, tornando-se importante a estrita segregação dos pacientes infectados.Objetivos: Padronizar a técnica de PCR-RFLP (reação em cadeia da polimerase seguida de clivagem com enzimas derestrição) para diferenciação das espécies de CBC e estabelecer a prevalência dessas espécies e seus perfis de sensibilidade em pacientes com FC atendidos no Hospital de Clínicas de Porto Alegre (HCPA). Métodos: A identificação dos isolados clínicos do trato respiratório de pacientes com FC como CBC foi feita pelo sistema deidentificação fenotípica comercial API-20NE®. A diferenciação das espécies de CBC foi realizada por PCR-RFLP, e o teste de suscetibilidade aos antimicrobianos por disco-difusão foi realizado de acordo com o CLSI (2006).Resultados: O sistema API-20NE® identificou todos os isolados do CBC (244 amostras) como B. cepacia, indicando claramente que não distingue as espécies do complexo. O método molecular de PCR-RFLP discriminou as oito espécies de referência de CBC, validando o método para isolados clínicos. A prevalência de CBC por PCR-RFLP foi de 10,6% (26/244).A análise molecular apontou B. cenocepacia colonizando em 53,8% (14/26) dos pacientes infectados, B. multivorans em 15,4% (4/26) e B. vietnamiensis e B. ambifaria em 7,7% (2/26). O perfil de resistência entre as espécies de CBC para os antibióticos testados foi variado. Conclusão: Foi validada a aplicação do método molecular PCR-RFLP para identificar espécies de CBC, e B. cenocepaciafoi a espécie mais prevalente entre os pacientes fibrocísticos atendidos no HCPA.


Subject(s)
Humans , Burkholderia cepacia complex/genetics , Cystic Fibrosis , Polymorphism, Restriction Fragment Length , Polymerase Chain Reaction/methods , Burkholderia Infections/diagnosis , Burkholderia Infections/microbiology
14.
International Journal of Organ Transplantation Medicine. 2010; 1 (4): 183-186
in English | IMEMR | ID: emr-145166

ABSTRACT

Concomitant pulmonary infections with Cryptococcus neoformans and Burkholderia cepacia in lung transplant recipients are very rare and create unique diagnostic and therapeutic dilemmas. Herein, we present a double lung transplant patient with cystic fibrosis who was found to have coinfection with these two rare organisms, though he was completely asymptomatic


Subject(s)
Humans , Adult , Male , Cystic Fibrosis/surgery , Cystic Fibrosis/microbiology , Cryptococcosis , Burkholderia Infections , Tomography, X-Ray Computed
15.
Braz. j. microbiol ; 40(4): 893-900, Oct.-Dec. 2009. graf, tab
Article in English | LILACS | ID: lil-528172

ABSTRACT

An enrichment culture technique was used to isolate bacterial strains responsible for the biodegradation of profenofos in a soil from Hubei province of central China. Two pure bacterial cultures, named W and Y, were isolated and subsequently characterized by sequencing of 16S rRNA genes and biochemical tests. Isolate W showed 96 percent similarity to the 16S rRNA gene of a Pseudomonas putida unlike Y which showed 99 percent similarity to the 16S rRNA gene of Burkholderia gladioli. Both strains grew well at pH 5.5-7.2 with a broad temperature profile ranging from 28º to 36 ºC. Bioremediation of profenofos-contaminated soil was examined using soil treated with 200 ug g-1; profenofos resulted in a higher degradation rate than control soils without inoculation. In a mineral salt medium (FTW) reduction in profenofos concentration was 90 percent within 96 hours of incubation. A literature survey revealed that no data is available regarding the role of Burkholderia gladioli on pesticide biodegradation as well as on profenofos.


Subject(s)
Base Sequence , Burkholderia Infections , Burkholderia gladioli/genetics , In Vitro Techniques , Insecticides, Organophosphate , RNA, Bacterial , Biodegradation, Environmental , Chromatography, Gas , Methods , Methods
16.
J. bras. pneumol ; 34(7): 461-467, jul. 2008. tab
Article in English, Portuguese | LILACS | ID: lil-488271

ABSTRACT

OBJETIVO: Determinar as relações entre infecção bacteriana crônica e hipertensão pulmonar, avaliada por ecocardiografia Doppler, em pacientes com fibrose cística (FC). MÉTODOS: Estudo transversal e prospectivo em pacientes com FC (idade > 16 anos) atendidos por um programa para adultos com a doença. O estudo incluiu 40 pacientes com média de idade de 23,7 ± 6,3 anos. Os pacientes foram submetidos a avaliação clínica, ecocardiografia Doppler, testes de função pulmonar, exame radiológico do tórax e exames culturais do escarro de Pseudomonas aeruginosa e Burkholderia cepacia. RESULTADOS: Não foram observadas diferenças entre os casos positivos para P. aeruginosa e os negativos para P. aeruginosa quanto às seguintes variáveis: escore clínico (p = 0,472); volume expiratório forçado no primeiro segundo (VEF1; p = 0,693); escore radiológico (p = 0,760); velocidade de regurgitação tricúspide (VRT, p = 0,330); diâmetro do ventrículo direito (DVD, p = 0,191); e tempo de aceleração sistólica (TAS) do ventrículo direito/artéria pulmonar (VD/AP, p = 0,330). O VEF1 foi significativamente menor nos casos positivos para B. cepacia do que nos casos negativos para B. cepacia (p = 0,011). Não foram observadas diferenças entre os casos positivos para B. cepacia e os casos negativos para B. cepacia quanto às seguintes variáveis: escore clínico (p = 0,080); escore radiológico (p = 0,760); VRT (p = 0,613); DVD (p = 0,429); e TAS do VD/AP (p = 0,149). CONCLUSÕES: Não foi observada relação entre infecção crônica por P. aeruginosa e por B. cepacia com hipertensão pulmonar em pacientes adultos com FC. A função pulmonar foi pior nos pacientes positivos para B. cepacia do que nos pacientes positivos para P. aeruginosa.


OBJECTIVES: To examine the relationship between chronic bacterial infection and pulmonary hypertension, using Doppler echocardiography, in patients with cystic fibrosis (CF). METHODS: A prospective cross-sectional study involving CF patients (>16 years of age) admitted to a program for adults with the disease. The study included 40 patients with a mean age of 23.7 ± 6.3 years. Patients were submitted to clinical evaluation, Doppler echocardiography, pulmonary function tests, chest X-rays and sputum cultures of Pseudomonas aeruginosa and Burkholderia cepacia. RESULTS: In terms of the following variables, no significant differences were found between P. aeruginosa-positive patients and P. aeruginosa-negative patients: clinical score (p = 0.472); forced expiratory volume in one second (FEV1; p = 0.693), radiological score (p = 0.760); tricuspid regurgitant jet velocity (TRV, p = 0.330); diameter of the right ventricle (DRV, p = 0.191); and right ventricular/pulmonary artery (RV/PA) systolic acceleration time (SAT, p = 0.330). B. cepacia-positive patients presented significantly lower FEV1 than did B. cepacia-negative patients (p = 0.011). No significant differences were found between B. cepacia-positive patients and B. cepacia-negative patients regarding the following variables: clinical score (p = 0.080); radiological score (p = 0.760); TRV (p = 0.613); DRV (p = 0.429); and RV/PA SAT (p = 0.149). CONCLUSIONS: Chronic infection with P. aeruginosa or B. cepacia presented no association with pulmonary hypertension in adult CF patients. Pulmonary function was worse in B. cepacia-positive patients than in P. aeruginosa-positive patients.


Subject(s)
Adolescent , Adult , Female , Humans , Male , Middle Aged , Young Adult , Burkholderia Infections , Cystic Fibrosis , Hypertension, Pulmonary , Pseudomonas Infections , Burkholderia cepacia/isolation & purification , Chronic Disease , Cross-Sectional Studies , Cystic Fibrosis/microbiology , Echocardiography, Doppler , Hypertension, Pulmonary/microbiology , Prospective Studies , Pseudomonas Infections/physiopathology , Pseudomonas aeruginosa/isolation & purification , Statistics, Nonparametric , Young Adult
17.
Rev. bras. anal. clin ; 40(1): 35-37, 2008. tab
Article in Portuguese | LILACS | ID: lil-510673

ABSTRACT

Infecção urinária é a presença de microorganismo na urina, e sua prevalência varia com o sexo e idade dos pacientes. O presente trabalho objetivou determinar a prevalência de infecção urinaria no laboratório de análises clinicas da UNIPAR no municípiode Umuarama-Pr. Foram analisados 328 prontuários dos pacientes que realizaram exames de cultura de urina no ano de 2005. Durante este período foram identificados 52 casos de infecção urinária e foram encontrados os seguintes agentes etiológicos: Escherichia colii (36,55%), Enterobacter sp. (21,16%), Klebsiella sp (17,30%), Estaphylococcus sp., (7,70%), Citrobacter sp. (5,76%), Pseudomonas aeruginosa (5,76%) Burkholderia cepacia (3,85%) Proteus sp. (1,92%). A maior prevalência de infecção urinária encontrado no presenteestudo foi do gênero feminino com uma prevalência de 14,6%. A Escherichia coli foi o microorganismo prevalente causador desta infecção. Os resultados obtidos neste estudo são de muita valia, pois permitem aplicação de um tratamento mais adequado, evitandodesta forma complicações e recidivas.


Urinary infection is the presence of microorganism in piss, e its prevalence varies with the sex and age of the patients. The present work objectified to determine the prevalence of infection would urinary in the laboratory of clinical analyses of the Unipar in the city of Umuarama-Pr. Had been analyzed 328 handbooks of the patients who had carried through examinations of piss culture in the year of 2005. During this period 52 cases of urinary infection had been identified and had been found the following agents etiologic: Escherichia colli (36.55%), Enterobacter sp. (21,16%), Klebsiella sp. (17.30%), Estaphylococcus sp., (7,70%), Citrobacter sp. (5,76%), Pseudomonas aeruginosa (5.76%) Burkholderia cepacia (3.85%) Proteus sp. (1,92%). The biggest prevalence of found urinaryinfection in the present study was of the feminine sort with a prevalence of 14,6%. The Escherichia coli were the .causing prevalent microorganism of this infection. The results gotten in this study are of much value, therefore they more allow application of an adjustedtreatment, preventing in such a way complications and returns.


Subject(s)
Humans , Child, Preschool , Child , Adolescent , Adult , Middle Aged , Aged, 80 and over , Prevalence , Urinalysis , Urinary Tract Infections , Urine , Bacterial Infections , Burkholderia Infections , Citrobacter , Enterobacteriaceae Infections , Escherichia coli Infections , Klebsiella Infections , Proteus Infections , Pseudomonas Infections , Staphylococcus aureus
18.
Indian J Med Sci ; 2007 Jul; 61(7): 422-9
Article in English | IMSEAR | ID: sea-68428

ABSTRACT

BACKGROUND: Burkholderia cepacia has been described as a cause of opportunist infections in patients with immune deficiency because of the high transmission rates. Actually the B. cepacia is subdivided in nine different genomic species that show morphological similarity, called genomovars. High mortality rates have been associated with infections caused by genomovars in susceptible patients; antibiotics are not efficient because of the high resistance level and genomic mutability. Little is known about the epidemiological traits of this bacterium; therefore, their isolation remains a relevant technical problem. AIMS: The objective of this review is to describe Burkholderia cepacia as a bacterial complex with high pathogenicity and variability of habitats. MATERIALS AND METHODS: A systematic search was realized using the international bibliographic databanks SCIELO, HIGHWIRE, PUBMED, SCIRUS and LILACS to provide a useful and practical review for the health workers that do not know this microorganism. CONCLUSIONS: Today, B. cepacia complex is a very important problem for the acquired immunodeficiency syndrome and cystic fibrosis patients. The immunodeficiency caused by these diseases is a positive factor for this microorganism to infect and kill these patients. Therefore, this opportunistic pathogen should be pointed out as a risk to these patients and hospitals all over the world must be prepared to detect and combat this bacterium.


Subject(s)
Burkholderia Infections/etiology , Burkholderia cepacia , Comorbidity , Cystic Fibrosis/complications , Humans , Opportunistic Infections/etiology , Prognosis , Risk Factors
19.
Rev. cuba. med. trop ; 58(2)mayo-ago. 2006. ilus
Article in Spanish | LILACS | ID: lil-460748

ABSTRACT

Se presentó el reporte de 2 casos que desarrollaron un síndrome de hiperinfección por Strongyloides stercoralis en el desarrollo del VIH/SIDA. Estos pacientes tenían una inmunodepresión severa con conteos de linfocitos de la subpoblación T CD4+ por debajo de 200 células/mm3. En el primer caso predominaron las manifestaciones respiratorias, donde se encontraron incontables larvas rabditoides de Strongyloides tanto en los esputos como en las heces. En el segundo caso fueron más comunes las manifestaciones neurológicas, pero solo se pudo detectar una larva de Strongyloides stercoralis por campo microscópico (100X de aumento) en heces. Ambos individuos, a pesar de la terapéutica aplicada, tuvieron un desenlace fatal. La importancia de este trabajo radica en tomar conciencia de la posibilidad de una infección diseminada por este helminto en algunos pacientes y estar alertas para un oportuno diagnóstico, y adecuado tratamiento o prevención de las fatales consecuencias de la infección por este nematodo


Two cases with hyperinfection syndrome caused by Strongyloides stercoralis in the development of HIV/AIDS were reported. These patients had a severe immunodepression with lymphocyte counts of the subpopulation of CD4+ T cells under 200 cells/mm3. In the first case, a predominance of respiratory manifestations was observed and numerous Strongyloides rhabditiform larvae were found in sputum and faeces. In the second case, the neurological manifestations were more common, but only a larva of Strongyloides stercoralis could be detected per microscopic field (100X of magnification) in faeces. Both individuals in spite of the applied therapeutics had a fatal end. The importance of this paper is to be aware of the possibility of an infection disseminated by this helminth in some patients, and to be ready for a suitable diagnosis and an adequate treatment or prevention of the fatal consequences of the infection caused by this nematode.


Subject(s)
AIDS-Related Opportunistic Infections , Burkholderia Infections
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